Computational Molecular Biology

Multiple Sequence Aligment

May 1, 2008

• Homework # 5

• Literature References
• Slides (HTML)
• Slides (PDF)
• SeqWeb Interface
• Pileup on PMGM
• ClustalW on PMGM
• ClustalW on Decypher Supercomputer
• Internet Resources
  • ClustalW at EBI
  • ClustalW at PIR
  • Multiple Sequence Alignment Methods
  • Baylor College of Medicine Search Launcher
  • MSA at Baylor College of Medicine
  • Block Maker
  • Sequence Alignment and Modeling System at UCSC
  • HMMER -- Hidden Markov model software at Wash. U.

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