Computer Applications in Molecular Biology

Genomics & Bioinformatics

September 23 , 2008

Doug Brutlag

General Reference Books

Books

  1. Baldi, P. and Brunak, S. (1998). Bioinformatics: The Machine Learning Approach (1st ed.). Cambridge, MA: The MIT Press.

  2. Baxevanis, A. D. and Ouellette, B. F. F. (2001). Bioinformatics: A practical Guide to the Analysis of Genes and Proteins.2nd Edition. New York, NY: John Wiley & Sons, Inc., 356 pages.

  3. Berg, J. M., Tymoczko, J. L. and Stryer, L.(2001) Biochemistry 5th edition.New York, W. H. Freeman, 974 pages.

  4. Cristianini, N. and Hahn M. W. (2006) Introduction to Computational Genomics, Cambridge University PRess, 201 pages.

  5. Deonier, Tavaré and Waterman, (2005) Computational Genome Analysis,, Springer , 535 pages.

  6. Doolittle, R. F. (1986). Of Urfs and Orfs: A Primer on How to Analyze Derived Amino Acid Sequences. University Science Books, Mill Valley, California.

  7. Doolittle, R. F. (1990). Molecular Evolution: Computer Analysis of Protein and Nucleic Acid Sequences (1 ed.). Methods in Enzymology Volume 183, New York: Academic Press.

  8. Doolittle, R. F. (1996). Computer Methods for Macromolecular Sequence Analysis. Methods in Enzymology, Vol. 266. New York: Academic Press. 711 pages.

  9. Durbin, R., Eddy, S., Krogh, A. and Michison, G. (1998). Biological Sequence Analysis (1st ed.). Cambridge, UK: Cambridge University Press.

  10. Ewens, W. J. and Grant, G. R. (2001) Statistical Methods in Bioinformatics. New York. Springer Verlag, 476 pages.

  11. Gibson, G. and Muse, S. V (2004) A Primer of Genome Science. Sunderland MA, Sinauer Asssociates, 347 Pages.

  12. Gusfield, D. (1997). Algorithms on Strings, Trees and Sequences. (1st. ed.). Cambridge, UK: Cambridge University Press, 534 pages.

  13. Higgs, P. G. and Attwood T. (2005) Bioinformatics  and Molecular Evolution. Blackwell Publishing, Oxford, UK, 365 pages.

  14. Higgins, D. & Taylor, Willie (2000) Bioinformatics: Sequence, structure and databanks. Oxford UK, Oxford University Press. 249 pages.

  15. JIang, T., Xu, Y. and Zhnag, M. Q. (2002) Current Topics in Computational Molecular Biology, MIT PRess, 556 pages

  16. Lander, E. S. and Waterman, M. S. (1995). Calculating the Secrets of Life: Applications of the Mathematical Sciences in Molecular Biology. Washington D. C.: National Academy Press, 285 pages.

  17. Lengauer, T. (2007) Bioinformatics: From Genomes to Therapies, 3 volumes 1814 pages.

  18. Lesk, A. (2002). Introduction to Bioinformatics Oxford University Press. Oxford England, 283 pages.

  19. Lewin, Benjamin (2008) Genes IX. Jones and Bartlett, 892 pages.. .

  20. Majoros, W. H. (2007) Methods for Computational Gene Prediction, Cambridge University Press, 448 pages.

  21. Mount, D. W. (2000). Bioinformatics: Sequence and Genome Analysis. Cold Spring Harbor Hew York, Cold Spring Harbor Press. 564 pages.

  22. Page, Roderic D. M. and Homes, Edward C. (1998) Molecular Evolution: A phylogenetic approach. Blackwell Press Oxford 752 pages.

  23. Patthy, Laszlo (1999) Protein Evolution. Blackwell Press. Oxford. 352 pages.

  24. Pevsner, Pavel (2000). Computational Molecular Biology: An Algorithmic Approach. Cambridge, MA, MIT Press 314 pages.

  25. Salzberg, S. L., Searls, D. B. and Kasif, S. (1998). Computational Methods in Molecular Biology. Amsterdam: Elsevier, 371 pages.

  26. Waterman, M. S. (1995). Introduction to Computational Biology. Chapman & Hall Press, London 430 pages.

  27. Xiong, Jin (2006) Essential Bioinformatics, Cambridge University Press, New York, 339 pages.